| Dry Creek Lake | Lincoln, WY | 7 miles | SE |
| Swift Creek Lake | Lincoln, WY | 7.2 miles | NE |
| Corral Creek Lake | Lincoln, WY | 8.4 miles | SE |
| Rock Lake | Lincoln, WY | 8.7 miles | NE |
| Cottonwood Lake | Lincoln, WY | 8.8 miles | SE |
| South Three Forks Lakes | Lincoln, WY | 9.1 miles | NE |
| Crow Creek Lakes | Lincoln, WY | 9.4 miles | NE |
| Slide Lake | Lincoln, WY | 10.1 miles | SE |
| Lake Bastow | Lincoln, WY | 10.5 miles | NE |
| Wagner Lake | Lincoln, WY | 11.3 miles | SE |
| Roaring Fork Lakes | Lincoln, WY | 16 miles | SE |
| Crystal Lake | Lincoln, WY | 16.1 miles | SE |
| North Piney Lake | Sublette, WY | 19.5 miles | SE |
| Travis Lake | Lincoln, WY | 20 miles | SE |
| Lost Lake | Lincoln, WY | 20.6 miles | NE |
| Middle Piney Lake | Sublette, WY | 20.8 miles | SE |
| Soda Lake | Sublette, WY | 20.8 miles | NE |
| Mud Lake | Sublette, WY | 20.9 miles | SE |
| Blind Bull Lake | Lincoln, WY | 21.9 miles | NE |
| The Ponds | Caribou, ID | 22.1 miles | SW |
| Murphy Lakes | Lincoln, WY | 23.4 miles | NE |
| Crystal Lake | Lincoln, WY | 23.8 miles | SE |
| Spring Lake | Lincoln, WY | 23.8 miles | SE |
| Stump Lake | Lincoln, WY | 24.5 miles | NE |
| Fontenelle Lakes | Lincoln, WY | 26.5 miles | SE |
| Swan Lakes | Caribou, ID | 28.1 miles | SW |
| Swan Lake | Caribou, ID | 28.1 miles | SW |
| Twin Creek Lakes | Lincoln, WY | 28.3 miles | SE |
| Huff Lake | Lincoln, WY | 28.6 miles | SW |
| Little Jenny Lake | Lincoln, WY | 29.1 miles | NW |
| Waterdog Lake | Lincoln, WY | 30.8 miles | NE |
| Devils Hole Lakes | Lincoln, WY | 31.3 miles | SE |
| Bailey Lake | Lincoln, WY | 33.3 miles | NE |
| Gronewell Lake | Caribou, ID | 33.5 miles | NW |
| Burchett Lake | Caribou, ID | 33.5 miles | NW |
| Grays Lake | Bonneville, ID | 34.6 miles | NW |
| The Reservoir | Caribou, ID | 34.6 miles | SW |
| Hole in the Rock | Caribou, ID | 34.8 miles | NW |
| Bartlett Lake | Bear Lake, ID | 35.1 miles | SW |
| The Narrows | Caribou, ID | 39.8 miles | NW |
| Pritchard Pond | Teton, WY | 40 miles | NE |
| Loa Lake | Caribou, ID | 40.2 miles | SW |
| Merkley Lake | Bear Lake, ID | 41.2 miles | SW |
| Meteor Hole | Bingham, ID | 43.5 miles | NW |
| Midnight Lake | Bear Lake, ID | 44.1 miles | SW |
| Mud Lake | Bear Lake, ID | 44.5 miles | SW |
| Rat Lake | Bingham, ID | 46.5 miles | NW |
| Lower Palisades Lake | Bonneville, ID | 50.3 miles | NW |
| Worm Lake | Bear Lake, ID | 50.3 miles | SW |
| Upper Palisades Lake | Bonneville, ID | 50.4 miles | NW |
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