| Lizard Lake | Teton, ID | 4.1 miles | SW |
| Mud Lake | Teton, ID | 11.1 miles | SE |
| McRenolds Reservoir | Teton, ID | 17.7 miles | NE |
| Paddy Lake | Fremont, ID | 22.6 miles | NE |
| Porcupine Lake | Fremont, ID | 23.4 miles | NE |
| Tule Lake | Fremont, ID | 23.5 miles | NE |
| Bergman Lake | Teton, WY | 23.6 miles | NE |
| Bergman Reservoir | Teton, WY | 24.1 miles | NE |
| Indian Lake | Teton, WY | 24.3 miles | NE |
| Lower Goose Lake | Fremont, ID | 25.2 miles | NE |
| Thompson Hole | Fremont, ID | 25.6 miles | NE |
| Upper Goose Lake | Fremont, ID | 26 miles | NE |
| Cub Lake | Fremont, ID | 26.8 miles | NE |
| Swan Lake | Fremont, ID | 27.2 miles | NE |
| Ashton Reservoir | Fremont, ID | 27.3 miles | NW |
| Steele Lake | Fremont, ID | 27.3 miles | NE |
| Palisades Reservoir | Bonneville, ID | 27.9 miles | SE |
| Palisades Reservoir | Johnson, WY | 27.9 miles | SE |
| Sleeping Indian Pond | Teton, WY | 28.1 miles | SE |
| Ririe Reservoir | Bonneville, ID | 28.2 miles | SW |
| Lemon Lake | Fremont, ID | 28.3 miles | NW |
| Mikesell Reservoir Number One | Fremont, ID | 32.1 miles | NW |
| Mikesell Reservoir Number 2 | Fremont, ID | 32.4 miles | NW |
| Jackson Lake | Teton, WY | 32.6 miles | NE |
| Hardeman Reservoir | Teton, WY | 32.6 miles | SE |
| Beaver Pond | Fremont, ID | 33 miles | NW |
| Lower Arcadia Reservoir | Fremont, ID | 33.1 miles | NW |
| Upper Arcadia Reservoir | Fremont, ID | 33.7 miles | NW |
| Grassy Lake | Teton, WY | 33.8 miles | NE |
| Grassy Lake Reservoir | Teton, WY | 33.9 miles | NE |
| Hardemann Reservoir | Teton, WY | 34.2 miles | SE |
| Hardiman Number 2 Reservoir | Teton, WY | 34.2 miles | SE |
| Egin Lakes | Fremont, ID | 35.3 miles | NW |
| Uhl Reservoir | Teton, WY | 37.2 miles | NE |
| Elk Ranch Reservoir | Teton, WY | 37.4 miles | NE |
| Sand Creek Reservoir | Fremont, ID | 37.7 miles | NW |
| Blue Creek Reservoir | Fremont, ID | 38.9 miles | NW |
| Swan Lake | Fremont, ID | 40.1 miles | NW |
| Hidden Lake Reservoir | Fremont, ID | 40.5 miles | NW |
| Wet Weather Reservoir | Fremont, ID | 40.8 miles | NW |
| Fish Pond | Fremont, ID | 41.1 miles | NW |
| Porter Reservoir | Teton, WY | 42 miles | NE |
| Wallace Draw-Reservoir | Teton, WY | 42.1 miles | NE |
| Robison Reservoir | Bingham, ID | 42.6 miles | SW |
| Silver Lake | Fremont, ID | 42.6 miles | NW |
| Sagebrush Spring Reservoir | Fremont, ID | 43.4 miles | NW |
| Tracy Lake | Teton, WY | 43.4 miles | NE |
| Grays Lake | Bonneville, ID | 44.4 miles | SW |
| Golden Lake | Fremont, ID | 44.7 miles | NW |
| Market Lake | Jefferson, ID | 45.5 miles | NW |
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